Merging CAGE experiments

From Muscle
Revision as of 12:23, 3 March 2021 by Ivan@dote.ru (talk | contribs) (Further directions)
Jump to: navigation, search

Merging CAGE experiments. This page describes the problem of merging independent CAGE-seq experiments and approaches to solving it.

Problem statement

Simple overlap strategy CAGE peak overhangs

Split reference peak Merge reference peaks

Algorithm overview

Segmentation of CAGE peaks

Results on rn6 data

Result of merging FANTOM5 and UEXP

Further directions

Closely spaced peaks