Difference between revisions of "Merging CAGE experiments"

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(Problem statement)
(Problem statement)
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[[File:CAGE_merging_split_reference_peak.png|Split reference peak]]
 
[[File:CAGE_merging_split_reference_peak.png|Split reference peak]]
 +
[[File:CAGE_merging_merge_reference_peaks.png|Merge reference peaks]]
  
 
===Algorithm overview===
 
===Algorithm overview===

Revision as of 12:19, 3 March 2021

Merging CAGE experiments. This page describes the problem of merging independent CAGE-seq experiments and approaches to solving it.

Problem statement

Simple overlap strategy CAGE peak overhangs

Split reference peak Merge reference peaks

Algorithm overview

Segmentation of CAGE peaks

Results on rn6 data

Further directions